Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.08□□□□□ -0.16
NR4A2P43354 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
NR4A2P43354 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.08□□□□□ -0.16
NR4A2P43354 DUX4L27-201ENST00000554796 1261 ntBASIC14.08□□□□□ -0.16
NR4A2P43354 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.08□□□□□ -0.16
NR4A2P43354 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.08□□□□□ -0.16
NR4A2P43354 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NR4A2P43354 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.08□□□□□ -0.16
NR4A2P43354 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
NR4A2P43354 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
NR4A2P43354 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR4A2P43354 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.07□□□□□ -0.16
NR4A2P43354 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NR4A2P43354 UXT-AS1-201ENST00000590504 1525 ntBASIC14.07□□□□□ -0.16
NR4A2P43354 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NR4A2P43354 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 RBPMS2P1-201ENST00000437762 623 ntBASIC14.07□□□□□ -0.16
NR4A2P43354 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.07□□□□□ -0.16
NR4A2P43354 AC069262.1-201ENST00000539058 672 ntBASIC14.07□□□□□ -0.16
NR4A2P43354 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.07□□□□□ -0.16
NR4A2P43354 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.07□□□□□ -0.16
NR4A2P43354 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.07□□□□□ -0.16
NR4A2P43354 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.07□□□□□ -0.16
NR4A2P43354 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 FGD5P1-202ENST00000614866 2498 ntBASIC14.07□□□□□ -0.16
NR4A2P43354 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.07□□□□□ -0.16
NR4A2P43354 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.07□□□□□ -0.16
NR4A2P43354 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.07□□□□□ -0.16
NR4A2P43354 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NR4A2P43354 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NR4A2P43354 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR4A2P43354 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
NR4A2P43354 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NR4A2P43354 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.06□□□□□ -0.16
NR4A2P43354 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR4A2P43354 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR4A2P43354 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
NR4A2P43354 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR4A2P43354 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
NR4A2P43354 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR4A2P43354 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
NR4A2P43354 MROH4P-201ENST00000431302 1578 ntBASIC14.06□□□□□ -0.16
NR4A2P43354 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR4A2P43354 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.06□□□□□ -0.16
NR4A2P43354 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.06□□□□□ -0.16
NR4A2P43354 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.06□□□□□ -0.16
NR4A2P43354 AL035633.1-201ENST00000406139 838 ntBASIC14.06□□□□□ -0.16
NR4A2P43354 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms