Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SOX3P41225 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX3P41225 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 AC123567.1-201ENST00000548294 1261 ntBASIC14.52□□□□□ -0.09
SOX3P41225 AL596325.1-201ENST00000563991 1082 ntBASIC14.52□□□□□ -0.09
SOX3P41225 RARRES2P5-201ENST00000564013 466 ntBASIC14.52□□□□□ -0.09
SOX3P41225 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.52□□□□□ -0.09
SOX3P41225 AC099568.2-201ENST00000609194 695 ntBASIC14.52□□□□□ -0.09
SOX3P41225 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SOX3P41225 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SOX3P41225 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 AL158212.4-201ENST00000624062 1286 ntBASIC14.52□□□□□ -0.09
SOX3P41225 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.52□□□□□ -0.09
SOX3P41225 AL358472.5-202ENST00000641448 1267 ntBASIC14.52□□□□□ -0.09
SOX3P41225 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SOX3P41225 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX3P41225 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX3P41225 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SOX3P41225 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX3P41225 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.52□□□□□ -0.09
SOX3P41225 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SOX3P41225 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.52□□□□□ -0.09
SOX3P41225 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.52□□□□□ -0.09
SOX3P41225 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.51□□□□□ -0.09
SOX3P41225 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 AC090616.6-203ENST00000579186 1945 ntBASIC14.51□□□□□ -0.09
SOX3P41225 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.51□□□□□ -0.09
SOX3P41225 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.51□□□□□ -0.09
SOX3P41225 DGCR5-201ENST00000399539 862 ntBASIC14.51□□□□□ -0.09
SOX3P41225 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.51□□□□□ -0.09
SOX3P41225 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
SOX3P41225 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.51□□□□□ -0.09
SOX3P41225 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 MYCLP2-201ENST00000449268 967 ntBASIC14.51□□□□□ -0.09
SOX3P41225 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.51□□□□□ -0.09
SOX3P41225 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.51□□□□□ -0.09
SOX3P41225 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.51□□□□□ -0.09
SOX3P41225 MIR4313-201ENST00000580760 101 ntBASIC14.51□□□□□ -0.09
SOX3P41225 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.51□□□□□ -0.09
SOX3P41225 AC093726.1-201ENST00000608064 963 ntBASIC14.51□□□□□ -0.09
SOX3P41225 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SOX3P41225 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.51□□□□□ -0.09
SOX3P41225 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SOX3P41225 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX3P41225 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX3P41225 LINC01101-201ENST00000622953 1884 ntBASIC14.5□□□□□ -0.09
SOX3P41225 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX3P41225 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SOX3P41225 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX3P41225 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX3P41225 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SOX3P41225 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX3P41225 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SOX3P41225 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms