Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
USP8P40818 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
USP8P40818 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
USP8P40818 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.84■□□□□ 0.29
USP8P40818 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
USP8P40818 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
USP8P40818 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP8P40818 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.83■□□□□ 0.28
USP8P40818 AC074338.1-201ENST00000416825 156 ntBASIC16.83■□□□□ 0.28
USP8P40818 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.83■□□□□ 0.28
USP8P40818 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.83■□□□□ 0.28
USP8P40818 KRT18P64-201ENST00000434946 1219 ntBASIC16.83■□□□□ 0.28
USP8P40818 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.83■□□□□ 0.28
USP8P40818 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.83■□□□□ 0.28
USP8P40818 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.83■□□□□ 0.28
USP8P40818 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.83■□□□□ 0.28
USP8P40818 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.83■□□□□ 0.28
USP8P40818 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.83■□□□□ 0.28
USP8P40818 DUX4L27-201ENST00000554796 1261 ntBASIC16.83■□□□□ 0.28
USP8P40818 ST20-AS1-201ENST00000560255 4223 ntBASIC16.83■□□□□ 0.28
USP8P40818 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.83■□□□□ 0.28
USP8P40818 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USP8P40818 AC025048.3-201ENST00000590609 569 ntBASIC16.83■□□□□ 0.28
USP8P40818 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
USP8P40818 AC005702.4-201ENST00000618393 416 ntBASIC16.83■□□□□ 0.28
USP8P40818 AF228730.6-201ENST00000641497 218 ntBASIC16.83■□□□□ 0.28
USP8P40818 AC084121.3-201ENST00000641716 218 ntBASIC16.83■□□□□ 0.28
USP8P40818 AL109936.8-201ENST00000641772 604 ntBASIC16.83■□□□□ 0.28
USP8P40818 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
USP8P40818 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
USP8P40818 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP8P40818 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP8P40818 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.82■□□□□ 0.28
USP8P40818 AC097493.3-201ENST00000509725 367 ntBASIC16.82■□□□□ 0.28
USP8P40818 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.82■□□□□ 0.28
USP8P40818 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
USP8P40818 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.82■□□□□ 0.28
USP8P40818 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP8P40818 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.82■□□□□ 0.28
USP8P40818 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP8P40818 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP8P40818 AC148477.4-201ENST00000613430 1793 ntBASIC16.82■□□□□ 0.28
USP8P40818 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP8P40818 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP8P40818 AL359183.1-201ENST00000623796 2132 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms