Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 AC254562.1-201ENST00000417586 456 ntBASIC18.16■□□□□ 0.5
MCM4P33991 ACTG1P14-201ENST00000446382 1122 ntBASIC18.16■□□□□ 0.5
MCM4P33991 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.16■□□□□ 0.5
MCM4P33991 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MCM4P33991 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.16■□□□□ 0.5
MCM4P33991 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.16■□□□□ 0.5
MCM4P33991 HNRNPUP1-201ENST00000554987 333 ntBASIC18.16■□□□□ 0.5
MCM4P33991 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.16■□□□□ 0.5
MCM4P33991 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.16■□□□□ 0.5
MCM4P33991 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.16■□□□□ 0.5
MCM4P33991 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.16■□□□□ 0.5
MCM4P33991 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.16■□□□□ 0.5
MCM4P33991 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.16■□□□□ 0.5
MCM4P33991 AC092902.6-201ENST00000641783 218 ntBASIC18.16■□□□□ 0.5
MCM4P33991 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MCM4P33991 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MCM4P33991 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MCM4P33991 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MCM4P33991 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MCM4P33991 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MCM4P33991 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MCM4P33991 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MCM4P33991 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MCM4P33991 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
MCM4P33991 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.15■□□□□ 0.5
MCM4P33991 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.15■□□□□ 0.5
MCM4P33991 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
MCM4P33991 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.15■□□□□ 0.5
MCM4P33991 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.15■□□□□ 0.5
MCM4P33991 TCAF1P1-201ENST00000414990 2232 ntBASIC18.15■□□□□ 0.5
MCM4P33991 GALC-206ENST00000544807 2528 ntTSL 2 BASIC18.15■□□□□ 0.5
MCM4P33991 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MCM4P33991 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
MCM4P33991 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.15■□□□□ 0.5
MCM4P33991 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 AC105206.1-202ENST00000314927 2368 ntBASIC18.15■□□□□ 0.5
MCM4P33991 AC027612.1-201ENST00000445234 2395 ntBASIC18.15■□□□□ 0.5
MCM4P33991 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.15■□□□□ 0.5
MCM4P33991 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
MCM4P33991 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
MCM4P33991 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC18.14■□□□□ 0.5
MCM4P33991 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
MCM4P33991 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MCM4P33991 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.14■□□□□ 0.5
MCM4P33991 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
MCM4P33991 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MCM4P33991 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MCM4P33991 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.14■□□□□ 0.49
MCM4P33991 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MCM4P33991 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MCM4P33991 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MCM4P33991 GHSR-202ENST00000427970 912 ntBASIC18.14■□□□□ 0.49
MCM4P33991 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MCM4P33991 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.14■□□□□ 0.49
MCM4P33991 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.14■□□□□ 0.49
MCM4P33991 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.14■□□□□ 0.49
MCM4P33991 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.14■□□□□ 0.49
MCM4P33991 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
MCM4P33991 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.14■□□□□ 0.49
MCM4P33991 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.14■□□□□ 0.49
MCM4P33991 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MCM4P33991 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MCM4P33991 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MCM4P33991 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms