Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.99□□□□□ -0.33
COL8A2P25067 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.99□□□□□ -0.33
COL8A2P25067 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
COL8A2P25067 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
COL8A2P25067 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
COL8A2P25067 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
COL8A2P25067 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 PPT1-215ENST00000641471 2368 ntBASIC12.98□□□□□ -0.33
COL8A2P25067 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 RPL7P3-201ENST00000441388 714 ntBASIC12.98□□□□□ -0.33
COL8A2P25067 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
COL8A2P25067 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.98□□□□□ -0.33
COL8A2P25067 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.98□□□□□ -0.33
COL8A2P25067 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.98□□□□□ -0.33
COL8A2P25067 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.98□□□□□ -0.33
COL8A2P25067 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
COL8A2P25067 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
COL8A2P25067 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.98□□□□□ -0.33
COL8A2P25067 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.97□□□□□ -0.33
COL8A2P25067 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.97□□□□□ -0.33
COL8A2P25067 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 CSF2RBP1-201ENST00000447905 391 ntBASIC12.97□□□□□ -0.33
COL8A2P25067 KRT18P25-201ENST00000508931 1278 ntBASIC12.97□□□□□ -0.33
COL8A2P25067 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.97□□□□□ -0.33
COL8A2P25067 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.97□□□□□ -0.33
COL8A2P25067 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.97□□□□□ -0.33
COL8A2P25067 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.97□□□□□ -0.33
COL8A2P25067 AC145423.3-201ENST00000615987 467 ntBASIC12.97□□□□□ -0.33
COL8A2P25067 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.97□□□□□ -0.33
COL8A2P25067 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms