Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MMP8P22894 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MMP8P22894 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP8P22894 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 FER1L4-210ENST00000615531 5998 ntBASIC16.11■□□□□ 0.17
MMP8P22894 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MMP8P22894 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP8P22894 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP8P22894 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 NUS1P3-201ENST00000423502 862 ntBASIC16.11■□□□□ 0.17
MMP8P22894 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 MYCLP2-201ENST00000449268 967 ntBASIC16.11■□□□□ 0.17
MMP8P22894 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.11■□□□□ 0.17
MMP8P22894 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP8P22894 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP8P22894 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP8P22894 BX539320.1-201ENST00000623759 877 ntBASIC16.11■□□□□ 0.17
MMP8P22894 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MMP8P22894 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.11■□□□□ 0.17
MMP8P22894 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.11■□□□□ 0.17
MMP8P22894 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.11■□□□□ 0.17
MMP8P22894 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MMP8P22894 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
MMP8P22894 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
MMP8P22894 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MMP8P22894 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP8P22894 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP8P22894 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MMP8P22894 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.1■□□□□ 0.17
MMP8P22894 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MMP8P22894 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.1■□□□□ 0.17
MMP8P22894 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.1■□□□□ 0.17
MMP8P22894 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.1■□□□□ 0.17
MMP8P22894 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.1■□□□□ 0.17
MMP8P22894 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.1■□□□□ 0.17
MMP8P22894 SPDYE22P-201ENST00000582158 798 ntBASIC16.1■□□□□ 0.17
MMP8P22894 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.1■□□□□ 0.17
MMP8P22894 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.1■□□□□ 0.17
MMP8P22894 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.1■□□□□ 0.17
MMP8P22894 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
MMP8P22894 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MMP8P22894 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MMP8P22894 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP8P22894 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP8P22894 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP8P22894 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms