Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CHCHD2P9-201ENST00000461726 456 ntBASIC18.46■□□□□ 0.55
KCNA3P22001 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.46■□□□□ 0.55
KCNA3P22001 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
KCNA3P22001 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.46■□□□□ 0.55
KCNA3P22001 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KCNA3P22001 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.46■□□□□ 0.55
KCNA3P22001 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA3P22001 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.46■□□□□ 0.55
KCNA3P22001 MIR5196-201ENST00000578146 115 ntBASIC18.46■□□□□ 0.55
KCNA3P22001 AC107464.3-201ENST00000609172 737 ntBASIC18.46■□□□□ 0.55
KCNA3P22001 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.46■□□□□ 0.55
KCNA3P22001 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
KCNA3P22001 AC148477.9-201ENST00000623974 539 ntBASIC18.46■□□□□ 0.55
KCNA3P22001 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.46■□□□□ 0.55
KCNA3P22001 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA3P22001 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.46■□□□□ 0.55
KCNA3P22001 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
KCNA3P22001 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA3P22001 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA3P22001 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA3P22001 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA3P22001 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
KCNA3P22001 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
KCNA3P22001 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.46■□□□□ 0.54
KCNA3P22001 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.45■□□□□ 0.54
KCNA3P22001 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 HIST2H2BA-201ENST00000412169 381 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.45■□□□□ 0.54
KCNA3P22001 MRPL22P1-201ENST00000505398 616 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.45■□□□□ 0.54
KCNA3P22001 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.45■□□□□ 0.54
KCNA3P22001 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.45■□□□□ 0.54
KCNA3P22001 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.45■□□□□ 0.54
KCNA3P22001 AC006158.1-201ENST00000610661 249 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.45■□□□□ 0.54
KCNA3P22001 AP001184.1-201ENST00000637936 376 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 CYP4F23P-201ENST00000593402 1579 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
KCNA3P22001 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 AL138725.1-201ENST00000407347 1314 ntBASIC18.45■□□□□ 0.54
KCNA3P22001 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA3P22001 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.45■□□□□ 0.54
KCNA3P22001 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 AC090502.4-201ENST00000551714 1386 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 BANF1P3-201ENST00000412556 261 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 AL157407.1-201ENST00000435784 904 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.44■□□□□ 0.54
KCNA3P22001 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 AC005041.3-201ENST00000606287 649 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 AC244250.3-201ENST00000620749 366 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.44■□□□□ 0.54
KCNA3P22001 AC092299.1-201ENST00000632679 757 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 LINC00431-202ENST00000636375 159 ntBASIC18.44■□□□□ 0.54
KCNA3P22001 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.44■□□□□ 0.54
KCNA3P22001 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KCNA3P22001 AL137783.1-201ENST00000623494 1896 ntBASIC18.43■□□□□ 0.54
KCNA3P22001 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms