Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.37■□□□□ 0.05
XRCC1P18887 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.37■□□□□ 0.05
XRCC1P18887 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.37■□□□□ 0.05
XRCC1P18887 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 SLED1-202ENST00000512051 380 ntBASIC15.37■□□□□ 0.05
XRCC1P18887 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.37■□□□□ 0.05
XRCC1P18887 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.37■□□□□ 0.05
XRCC1P18887 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.37■□□□□ 0.05
XRCC1P18887 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.37■□□□□ 0.05
XRCC1P18887 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.37■□□□□ 0.05
XRCC1P18887 TMEM261P1-201ENST00000604899 340 ntBASIC15.37■□□□□ 0.05
XRCC1P18887 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
XRCC1P18887 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.36■□□□□ 0.05
XRCC1P18887 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.36■□□□□ 0.05
XRCC1P18887 AP006294.1-201ENST00000415407 339 ntBASIC15.36■□□□□ 0.05
XRCC1P18887 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.36■□□□□ 0.05
XRCC1P18887 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 RN7SL399P-201ENST00000471648 279 ntBASIC15.36■□□□□ 0.05
XRCC1P18887 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 AC104596.2-201ENST00000512793 793 ntBASIC15.36■□□□□ 0.05
XRCC1P18887 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.36■□□□□ 0.05
XRCC1P18887 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.36■□□□□ 0.05
XRCC1P18887 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
XRCC1P18887 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 GRK6P1-201ENST00000400595 1711 ntBASIC15.36■□□□□ 0.05
XRCC1P18887 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
XRCC1P18887 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.36■□□□□ 0.05
XRCC1P18887 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 AL607033.1-201ENST00000623900 1599 ntBASIC15.36■□□□□ 0.05
XRCC1P18887 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
XRCC1P18887 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
XRCC1P18887 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
XRCC1P18887 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms