Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.42□□□□□ -0.26
CCL2P13500 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CCL2P13500 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 MYO15B-237ENST00000642007 4893 ntBASIC13.41□□□□□ -0.26
CCL2P13500 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL2P13500 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 DRD5P1-201ENST00000456605 1438 ntBASIC13.41□□□□□ -0.26
CCL2P13500 AC007326.2-201ENST00000624224 7579 ntBASIC13.41□□□□□ -0.26
CCL2P13500 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 INTS4P2-202ENST00000614726 2019 ntBASIC13.41□□□□□ -0.26
CCL2P13500 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CCL2P13500 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL2P13500 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL2P13500 AC134915.1-201ENST00000426461 574 ntBASIC13.41□□□□□ -0.26
CCL2P13500 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL2P13500 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.41□□□□□ -0.26
CCL2P13500 BRI3BPP1-201ENST00000594224 787 ntBASIC13.41□□□□□ -0.26
CCL2P13500 LINC02084-201ENST00000606069 1096 ntBASIC13.41□□□□□ -0.26
CCL2P13500 AC107373.2-201ENST00000607735 490 ntBASIC13.41□□□□□ -0.26
CCL2P13500 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL2P13500 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL2P13500 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCL2P13500 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL2P13500 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL2P13500 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 AC126365.1-201ENST00000578585 1514 ntBASIC13.4□□□□□ -0.26
CCL2P13500 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL2P13500 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL2P13500 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL2P13500 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.26
CCL2P13500 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 AL035633.1-201ENST00000406139 838 ntBASIC13.4□□□□□ -0.26
CCL2P13500 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 WFDC1-204ENST00000613603 549 ntBASIC13.4□□□□□ -0.26
CCL2P13500 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL2P13500 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL2P13500 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms