Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
FREM3P0C091 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 ARSEP1-201ENST00000420443 635 ntBASIC13.93□□□□□ -0.18
FREM3P0C091 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 RHOXF1P1-202ENST00000635473 501 ntBASIC13.93□□□□□ -0.18
FREM3P0C091 COX11-210ENST00000639671 696 ntBASIC13.93□□□□□ -0.18
FREM3P0C091 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
FREM3P0C091 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.93□□□□□ -0.18
FREM3P0C091 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FREM3P0C091 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.92□□□□□ -0.18
FREM3P0C091 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
FREM3P0C091 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.92□□□□□ -0.18
FREM3P0C091 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
FREM3P0C091 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
FREM3P0C091 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.92□□□□□ -0.18
FREM3P0C091 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
FREM3P0C091 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
FREM3P0C091 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
FREM3P0C091 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 REXO1L4P-201ENST00000605109 1937 ntBASIC13.92□□□□□ -0.18
FREM3P0C091 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
FREM3P0C091 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.92□□□□□ -0.18
FREM3P0C091 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
FREM3P0C091 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.91□□□□□ -0.18
FREM3P0C091 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
FREM3P0C091 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
FREM3P0C091 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
FREM3P0C091 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 GK-202ENST00000378941 458 ntTSL 3 BASIC13.91□□□□□ -0.18
FREM3P0C091 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
FREM3P0C091 AL391280.1-201ENST00000506969 1062 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
FREM3P0C091 CLUHP6-201ENST00000580789 941 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 AL359881.2-201ENST00000602973 570 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 AC145423.3-201ENST00000615987 467 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.91□□□□□ -0.18
FREM3P0C091 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
FREM3P0C091 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.91□□□□□ -0.18
FREM3P0C091 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.91□□□□□ -0.18
FREM3P0C091 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.91□□□□□ -0.18
FREM3P0C091 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.91□□□□□ -0.18
FREM3P0C091 RPL5P21-201ENST00000404620 815 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
FREM3P0C091 AP003171.2-201ENST00000528208 925 ntBASIC13.91□□□□□ -0.18
FREM3P0C091 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms