Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLTAP09496 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLTAP09496 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CLTAP09496 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.84■□□□□ 0.29
CLTAP09496 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLTAP09496 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLTAP09496 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLTAP09496 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLTAP09496 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.83■□□□□ 0.29
CLTAP09496 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLTAP09496 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLTAP09496 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 TTTY23B-201ENST00000442790 549 ntBASIC16.83■□□□□ 0.28
CLTAP09496 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.83■□□□□ 0.28
CLTAP09496 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.83■□□□□ 0.28
CLTAP09496 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLTAP09496 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.83■□□□□ 0.28
CLTAP09496 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.83■□□□□ 0.28
CLTAP09496 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.83■□□□□ 0.28
CLTAP09496 AC010319.3-201ENST00000597028 470 ntBASIC16.83■□□□□ 0.28
CLTAP09496 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.83■□□□□ 0.28
CLTAP09496 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.83■□□□□ 0.28
CLTAP09496 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLTAP09496 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLTAP09496 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLTAP09496 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.82■□□□□ 0.28
CLTAP09496 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
CLTAP09496 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.82■□□□□ 0.28
CLTAP09496 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 AC022532.1-201ENST00000624563 1728 ntBASIC16.82■□□□□ 0.28
CLTAP09496 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CLTAP09496 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.82■□□□□ 0.28
CLTAP09496 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 ACTG1P3-201ENST00000431775 1114 ntBASIC16.82■□□□□ 0.28
CLTAP09496 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.82■□□□□ 0.28
CLTAP09496 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.82■□□□□ 0.28
CLTAP09496 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.82■□□□□ 0.28
CLTAP09496 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.82■□□□□ 0.28
CLTAP09496 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.82■□□□□ 0.28
CLTAP09496 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.82■□□□□ 0.28
CLTAP09496 RPSAP52-203ENST00000622976 1023 ntBASIC16.82■□□□□ 0.28
CLTAP09496 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLTAP09496 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms