Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.74■□□□□ 0.11
MT-ND3P03897 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 AL512638.1-201ENST00000457493 794 ntBASIC15.74■□□□□ 0.11
MT-ND3P03897 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.74■□□□□ 0.11
MT-ND3P03897 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 AL390955.2-201ENST00000603032 514 ntBASIC15.74■□□□□ 0.11
MT-ND3P03897 AC097359.3-201ENST00000603982 1210 ntBASIC15.74■□□□□ 0.11
MT-ND3P03897 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.74■□□□□ 0.11
MT-ND3P03897 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MT-ND3P03897 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MT-ND3P03897 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.73■□□□□ 0.11
MT-ND3P03897 RPL5P21-201ENST00000404620 815 ntBASIC15.73■□□□□ 0.11
MT-ND3P03897 AL035633.1-201ENST00000406139 838 ntBASIC15.73■□□□□ 0.11
MT-ND3P03897 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.73■□□□□ 0.11
MT-ND3P03897 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.73■□□□□ 0.11
MT-ND3P03897 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.73■□□□□ 0.11
MT-ND3P03897 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MT-ND3P03897 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MT-ND3P03897 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MT-ND3P03897 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
MT-ND3P03897 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
MT-ND3P03897 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND3P03897 CICP14-201ENST00000629111 2732 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.72■□□□□ 0.11
MT-ND3P03897 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MT-ND3P03897 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 FAM220BP-201ENST00000377689 816 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms