Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.68□□□□□ -0.22
APOC1P02654 AC069262.1-201ENST00000539058 672 ntBASIC13.68□□□□□ -0.22
APOC1P02654 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.68□□□□□ -0.22
APOC1P02654 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC1P02654 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.68□□□□□ -0.22
APOC1P02654 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
APOC1P02654 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
APOC1P02654 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC1P02654 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC1P02654 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOC1P02654 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
APOC1P02654 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC1P02654 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 AP000347.1-202ENST00000435868 847 ntBASIC13.67□□□□□ -0.22
APOC1P02654 TARDBPP1-201ENST00000442013 1203 ntBASIC13.67□□□□□ -0.22
APOC1P02654 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC1P02654 SLED1-202ENST00000512051 380 ntBASIC13.67□□□□□ -0.22
APOC1P02654 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
APOC1P02654 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC1P02654 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.67□□□□□ -0.22
APOC1P02654 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOC1P02654 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC1P02654 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC1P02654 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC1P02654 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
APOC1P02654 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
APOC1P02654 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
APOC1P02654 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC1P02654 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC1P02654 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms