Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MEG3_2.1-201ENST00000611456 105 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 AC136759.1-202ENST00000530858 2194 ntBASIC17.23■□□□□ 0.35
ALDH1A1P00352 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ALDH1A1P00352 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALDH1A1P00352 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 AC011840.2-201ENST00000563063 1520 ntBASIC17.22■□□□□ 0.35
ALDH1A1P00352 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 PSMD4P1-201ENST00000433951 1109 ntBASIC17.22■□□□□ 0.35
ALDH1A1P00352 DUTP3-201ENST00000450025 415 ntBASIC17.22■□□□□ 0.35
ALDH1A1P00352 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 RN7SL81P-201ENST00000493781 261 ntBASIC17.22■□□□□ 0.35
ALDH1A1P00352 SIGLEC18P-201ENST00000602271 909 ntBASIC17.22■□□□□ 0.35
ALDH1A1P00352 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 AC148477.9-201ENST00000623974 539 ntBASIC17.22■□□□□ 0.35
ALDH1A1P00352 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALDH1A1P00352 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ALDH1A1P00352 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 MIR557-201ENST00000385239 98 ntBASIC17.21■□□□□ 0.35
ALDH1A1P00352 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 MIR3188-201ENST00000583494 85 ntBASIC17.21■□□□□ 0.35
ALDH1A1P00352 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
ALDH1A1P00352 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALDH1A1P00352 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
ALDH1A1P00352 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
ALDH1A1P00352 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALDH1A1P00352 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ALDH1A1P00352 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.21■□□□□ 0.34
ALDH1A1P00352 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALDH1A1P00352 AL360270.3-201ENST00000609118 1348 ntBASIC17.21■□□□□ 0.34
ALDH1A1P00352 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ALDH1A1P00352 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALDH1A1P00352 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ALDH1A1P00352 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ALDH1A1P00352 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms