Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.92□□□□□ -0.34
SIX6O95475 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 AC002347.1-201ENST00000569543 541 ntBASIC12.92□□□□□ -0.34
SIX6O95475 AP002414.4-201ENST00000589764 1148 ntBASIC12.92□□□□□ -0.34
SIX6O95475 AC092329.2-201ENST00000598402 547 ntBASIC12.92□□□□□ -0.34
SIX6O95475 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.92□□□□□ -0.34
SIX6O95475 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SIX6O95475 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 AC073439.1-201ENST00000624121 1774 ntBASIC12.92□□□□□ -0.34
SIX6O95475 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.91□□□□□ -0.34
SIX6O95475 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
SIX6O95475 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.91□□□□□ -0.34
SIX6O95475 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 TSSC2-201ENST00000450217 709 ntBASIC12.91□□□□□ -0.34
SIX6O95475 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 RPS15P9-201ENST00000494093 319 ntBASIC12.91□□□□□ -0.34
SIX6O95475 AC104819.1-201ENST00000504587 486 ntBASIC12.91□□□□□ -0.34
SIX6O95475 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
SIX6O95475 MTDHP4-201ENST00000600287 670 ntBASIC12.91□□□□□ -0.34
SIX6O95475 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SIX6O95475 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.91□□□□□ -0.34
SIX6O95475 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SIX6O95475 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.91□□□□□ -0.34
SIX6O95475 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
SIX6O95475 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.9□□□□□ -0.34
SIX6O95475 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.9□□□□□ -0.34
SIX6O95475 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
SIX6O95475 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SIX6O95475 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.9□□□□□ -0.34
SIX6O95475 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.9□□□□□ -0.34
SIX6O95475 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.9□□□□□ -0.34
SIX6O95475 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SIX6O95475 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.9□□□□□ -0.34
SIX6O95475 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms