Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLN5O75503 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLN5O75503 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLN5O75503 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLN5O75503 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 HLA-A-201ENST00000376802 1334 ntBASIC12.66□□□□□ -0.38
CLN5O75503 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 PMS2P7-201ENST00000506558 1336 ntBASIC12.66□□□□□ -0.38
CLN5O75503 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 AC136759.1-202ENST00000530858 2194 ntBASIC12.66□□□□□ -0.38
CLN5O75503 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 WASH6P-202ENST00000359512 1437 ntBASIC12.66□□□□□ -0.38
CLN5O75503 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLN5O75503 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.66□□□□□ -0.38
CLN5O75503 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLN5O75503 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CLN5O75503 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.66□□□□□ -0.38
CLN5O75503 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.66□□□□□ -0.38
CLN5O75503 AC145285.3-201ENST00000564603 959 ntBASIC12.66□□□□□ -0.38
CLN5O75503 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.66□□□□□ -0.38
CLN5O75503 AC064836.3-201ENST00000607928 673 ntBASIC12.66□□□□□ -0.38
CLN5O75503 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.66□□□□□ -0.38
CLN5O75503 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.66□□□□□ -0.38
CLN5O75503 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 AL589702.1-201ENST00000641229 1509 ntBASIC12.66□□□□□ -0.38
CLN5O75503 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLN5O75503 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.66□□□□□ -0.38
CLN5O75503 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.66□□□□□ -0.38
CLN5O75503 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.65□□□□□ -0.38
CLN5O75503 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.65□□□□□ -0.38
CLN5O75503 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CLN5O75503 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLN5O75503 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.65□□□□□ -0.38
CLN5O75503 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 AC104109.2-201ENST00000602919 1418 ntBASIC12.65□□□□□ -0.38
CLN5O75503 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLN5O75503 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.65□□□□□ -0.38
CLN5O75503 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLN5O75503 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.65□□□□□ -0.38
CLN5O75503 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN5O75503 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CLN5O75503 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms