Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 SBF1P1-201ENST00000444527 5631 ntBASIC15.35■□□□□ 0.05
NDUFS3O75489 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.35■□□□□ 0.05
NDUFS3O75489 AC023824.1-201ENST00000562945 2975 ntBASIC15.35■□□□□ 0.05
NDUFS3O75489 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.35■□□□□ 0.05
NDUFS3O75489 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
NDUFS3O75489 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 RARRES2P5-201ENST00000564013 466 ntBASIC15.35■□□□□ 0.05
NDUFS3O75489 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 LINC02228-204ENST00000642115 2962 ntBASIC15.35■□□□□ 0.05
NDUFS3O75489 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.35■□□□□ 0.05
NDUFS3O75489 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFS3O75489 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.35■□□□□ 0.05
NDUFS3O75489 CLK3P2-201ENST00000427566 1453 ntBASIC15.34■□□□□ 0.05
NDUFS3O75489 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDUFS3O75489 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NDUFS3O75489 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 SPDYE19P-201ENST00000338590 713 ntBASIC15.34■□□□□ 0.05
NDUFS3O75489 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.34■□□□□ 0.05
NDUFS3O75489 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.34■□□□□ 0.05
NDUFS3O75489 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDUFS3O75489 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.34■□□□□ 0.05
NDUFS3O75489 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NDUFS3O75489 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
NDUFS3O75489 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NDUFS3O75489 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NDUFS3O75489 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NDUFS3O75489 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
NDUFS3O75489 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 AC012508.2-201ENST00000567613 1472 ntBASIC15.33■□□□□ 0.05
NDUFS3O75489 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFS3O75489 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFS3O75489 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.33■□□□□ 0.05
NDUFS3O75489 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFS3O75489 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFS3O75489 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
NDUFS3O75489 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.33■□□□□ 0.05
NDUFS3O75489 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NDUFS3O75489 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NDUFS3O75489 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.33■□□□□ 0.04
NDUFS3O75489 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms