Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 INE1-201ENST00000456273 945 ntBASIC13.95□□□□□ -0.18
LINC01387J3KSC0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 AC126177.1-201ENST00000547829 2218 ntBASIC13.95□□□□□ -0.18
LINC01387J3KSC0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 AC020658.6-201ENST00000623564 1870 ntBASIC13.95□□□□□ -0.18
LINC01387J3KSC0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC01387J3KSC0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 RN7SL837P-201ENST00000463010 287 ntBASIC13.94□□□□□ -0.18
LINC01387J3KSC0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 GIMAP3P-201ENST00000495150 836 ntBASIC13.94□□□□□ -0.18
LINC01387J3KSC0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 PTP4A1P2-201ENST00000546033 454 ntBASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC106886.1-201ENST00000568660 600 ntBASIC13.94□□□□□ -0.18
LINC01387J3KSC0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC239800.4-201ENST00000603712 296 ntBASIC13.94□□□□□ -0.18
LINC01387J3KSC0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01387J3KSC0 AC092127.1-201ENST00000567093 3455 ntBASIC13.94□□□□□ -0.18
LINC01387J3KSC0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC01387J3KSC0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms