Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 BCYRN1-201ENST00000418539 200 ntBASIC13.37□□□□□ -0.27
MBD3L3A6NE82 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 AP001002.3-201ENST00000623482 206 ntBASIC13.37□□□□□ -0.27
MBD3L3A6NE82 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L3A6NE82 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AC018735.1-201ENST00000437208 1502 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AC126365.1-201ENST00000578585 1514 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 RN7SKP175-201ENST00000408472 289 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AL354877.1-201ENST00000424412 413 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AC126915.1-201ENST00000522847 1038 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AC138696.2-201ENST00000607376 223 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 TMBIM7P-203ENST00000641617 1718 ntBASIC13.36□□□□□ -0.27
MBD3L3A6NE82 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L3A6NE82 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms