Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
MEIS3P1A6NDR6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MEIS3P1A6NDR6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MEIS3P1A6NDR6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.25□□□□□ -0.29
MEIS3P1A6NDR6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MEIS3P1A6NDR6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 UNC93B7-201ENST00000509439 705 ntBASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC018845.2-201ENST00000568326 409 ntBASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AL161645.1-201ENST00000622716 1255 ntBASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 AC084364.1-201ENST00000551967 1556 ntBASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MEIS3P1A6NDR6 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 EMBP1-201ENST00000458200 901 ntBASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MEIS3P1A6NDR6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms