Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 LINC00528-201ENST00000600723 2160 ntBASIC14.6□□□□□ -0.07
LRIT2A6NDA9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRIT2A6NDA9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 AC027307.3-201ENST00000594262 1100 ntBASIC14.59□□□□□ -0.07
LRIT2A6NDA9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 ACE3P-201ENST00000423435 1973 ntBASIC14.59□□□□□ -0.07
LRIT2A6NDA9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 NORAD-201ENST00000565493 5339 ntBASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.59□□□□□ -0.07
LRIT2A6NDA9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRIT2A6NDA9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRIT2A6NDA9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LRIT2A6NDA9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LRIT2A6NDA9 AL157414.3-201ENST00000624276 1954 ntBASIC14.58□□□□□ -0.07
LRIT2A6NDA9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRIT2A6NDA9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LRIT2A6NDA9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRIT2A6NDA9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AP001582.1-201ENST00000525856 295 ntBASIC14.58□□□□□ -0.08
LRIT2A6NDA9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AC025048.6-201ENST00000634326 1161 ntBASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AL033527.5-201ENST00000641382 801 ntBASIC14.58□□□□□ -0.08
LRIT2A6NDA9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.58□□□□□ -0.08
LRIT2A6NDA9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms