Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC106028.4-201ENST00000614509 607 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AL390754.1-201ENST00000619088 582 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC087386.2-201ENST00000623212 4637 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 AC023024.2-201ENST00000623561 1993 ntBASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRGV1A0A0A0MS02 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 LINC02228-204ENST00000642115 2962 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC100757.3-201ENST00000622361 1406 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC087499.5-201ENST00000452760 1342 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC103702.1-201ENST00000548801 2630 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC015922.1-201ENST00000421102 1152 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AL512638.1-201ENST00000457493 794 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC097493.3-201ENST00000509725 367 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 DUX4L27-201ENST00000554796 1261 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC044860.1-202ENST00000559481 777 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 GPALPP1-207ENST00000611650 899 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AF228730.6-201ENST00000641497 218 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 AC084121.3-201ENST00000641716 218 ntBASIC11.21□□□□□ -0.61
TRGV1A0A0A0MS02 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV1A0A0A0MS02 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC006058.4-201ENST00000624016 1670 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 AC091951.1-201ENST00000512854 2465 ntBASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV1A0A0A0MS02 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms