Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCDC187A0A096LP49 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 CHMP1AP1-201ENST00000445563 662 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 RN7SL720P-201ENST00000488178 304 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 IMP3P2-201ENST00000489760 475 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 FTLP10-202ENST00000505798 471 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AC005730.2-201ENST00000564549 1184 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AC097724.1-201ENST00000609581 426 ntBASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC187A0A096LP49 KRT8P29-201ENST00000420409 1371 ntBASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AC011742.3-201ENST00000439053 820 ntBASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 RN7SL11P-201ENST00000471305 293 ntBASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AC100850.1-201ENST00000506768 649 ntBASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AC106794.1-201ENST00000506935 792 ntBASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 AP003171.2-201ENST00000528208 925 ntBASIC14.47□□□□□ -0.09
CCDC187A0A096LP49 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms