Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC084346.2-201ENST00000607097 949 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 AL589739.1-201ENST00000607720 493 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 AC008738.7-201ENST00000609744 511 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 OR2I1P-210ENST00000642037 4691 ntBASIC14.99□□□□□ -0.01
VPS4AQ9UN37 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS4AQ9UN37 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AC135586.1-201ENST00000539323 574 ntBASIC14.98□□□□□ -0.01
VPS4AQ9UN37 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AC106886.1-201ENST00000568660 600 ntBASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AL606495.2-201ENST00000605867 535 ntBASIC14.98□□□□□ -0.01
VPS4AQ9UN37 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS4AQ9UN37 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS4AQ9UN37 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms