Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 MIR7845-201ENST00000618396 99 ntBASIC20.73■□□□□ 0.91
USP35Q9P2H5 AC091812.3-201ENST00000621362 345 ntBASIC20.73■□□□□ 0.91
USP35Q9P2H5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP35Q9P2H5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
USP35Q9P2H5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.72■□□□□ 0.91
USP35Q9P2H5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 FTLP10-202ENST00000505798 471 ntBASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC126915.1-201ENST00000522847 1038 ntBASIC20.72■□□□□ 0.91
USP35Q9P2H5 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AP001505.2-201ENST00000616815 443 ntBASIC20.72■□□□□ 0.91
USP35Q9P2H5 CU633904.3-201ENST00000624042 1029 ntBASIC20.72■□□□□ 0.91
USP35Q9P2H5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.72■□□□□ 0.91
USP35Q9P2H5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP35Q9P2H5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 NKAIN1P1-201ENST00000435754 582 ntBASIC20.71■□□□□ 0.91
USP35Q9P2H5 POM121L10P-201ENST00000436994 1285 ntBASIC20.71■□□□□ 0.91
USP35Q9P2H5 HSPB1P2-201ENST00000448722 546 ntBASIC20.71■□□□□ 0.91
USP35Q9P2H5 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms