Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 MRPS18AP1-201ENST00000414458 589 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 DOC2GP-202ENST00000514950 1163 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 RNA5SP421-201ENST00000516864 134 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TPRX2P-201ENST00000535362 881 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 AC012508.2-201ENST00000567613 1472 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 AL391069.4-201ENST00000609583 481 ntBASIC12.75□□□□□ -0.37
CALYQ9NYX4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CALYQ9NYX4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CALYQ9NYX4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 LINC00528-201ENST00000600723 2160 ntBASIC12.74□□□□□ -0.37
CALYQ9NYX4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 CLK3P2-201ENST00000427566 1453 ntBASIC12.74□□□□□ -0.37
CALYQ9NYX4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 INGX-202ENST00000489074 768 ntBASIC12.74□□□□□ -0.37
CALYQ9NYX4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 RARRES2P5-201ENST00000564013 466 ntBASIC12.74□□□□□ -0.37
CALYQ9NYX4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CALYQ9NYX4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CALYQ9NYX4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CALYQ9NYX4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CALYQ9NYX4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.73□□□□□ -0.37
CALYQ9NYX4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CALYQ9NYX4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CALYQ9NYX4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CALYQ9NYX4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.73□□□□□ -0.37
CALYQ9NYX4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms