Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLN6Q9NWW5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.11□□□□□ -0.15
CLN6Q9NWW5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AL607033.1-201ENST00000623900 1599 ntBASIC14.1□□□□□ -0.15
CLN6Q9NWW5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AL662844.1-201ENST00000546340 181 ntBASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 PDPK2P-202ENST00000562415 1191 ntBASIC14.1□□□□□ -0.15
CLN6Q9NWW5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 FOXO1B-201ENST00000504678 1527 ntBASIC14.1□□□□□ -0.15
CLN6Q9NWW5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLN6Q9NWW5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 PEG13-201ENST00000631594 5667 ntBASIC14.09□□□□□ -0.15
CLN6Q9NWW5 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AC136604.1-201ENST00000418535 575 ntBASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AC099522.2-201ENST00000607001 744 ntBASIC14.09□□□□□ -0.15
CLN6Q9NWW5 AC026979.3-201ENST00000607315 403 ntBASIC14.09□□□□□ -0.15
CLN6Q9NWW5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CLN6Q9NWW5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms