Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NUS1P3-201ENST00000423502 862 ntBASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 ENPP7P5-201ENST00000541031 1031 ntBASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 CU634019.7-201ENST00000624153 1185 ntBASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 FP236241.2-201ENST00000624906 1185 ntBASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BLOC1S4Q9NUP1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 CICP14-201ENST00000629111 2732 ntBASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BLOC1S4Q9NUP1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 DUX4L47-201ENST00000566374 394 ntBASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AC025048.6-201ENST00000634326 1161 ntBASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 AL033527.5-201ENST00000641382 801 ntBASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 KRT8P14-201ENST00000414254 1442 ntBASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 MSTO2P-201ENST00000314835 1709 ntBASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BLOC1S4Q9NUP1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 KLF2P2-201ENST00000416807 1039 ntBASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 AC093433.1-201ENST00000458048 571 ntBASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
BLOC1S4Q9NUP1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms