Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 AC016397.2-201ENST00000624848 1985 ntBASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 SLC25A6P4-201ENST00000586535 553 ntBASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.63■□□□□ 0.41
LMBRD1Q9NUN5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 HLA-A-201ENST00000376802 1334 ntBASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LMBRD1Q9NUN5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 AL133267.1-201ENST00000398220 340 ntBASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 SPDYE11-202ENST00000450699 704 ntBASIC17.61■□□□□ 0.41
LMBRD1Q9NUN5 SLED1-202ENST00000512051 380 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms