Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AP000845.1-201ENST00000581677 2131 ntBASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AC012508.2-201ENST00000567613 1472 ntBASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 KRT18P3-201ENST00000451602 1288 ntBASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AC027601.4-201ENST00000611259 610 ntBASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AC084121.4-201ENST00000641598 221 ntBASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AF228730.8-201ENST00000642140 221 ntBASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.53□□□□□ -0.4
CTNNBIP1Q9NSA3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.52□□□□□ -0.4
CTNNBIP1Q9NSA3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 KRT8P48-201ENST00000515599 1220 ntBASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 SLC25A39P2-201ENST00000537614 270 ntBASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 AC055717.3-201ENST00000622967 595 ntBASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTNNBIP1Q9NSA3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms