Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.2■□□□□ 0.34
CBX8Q9HC52 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CBX8Q9HC52 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.19■□□□□ 0.34
CBX8Q9HC52 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 SPDYE17-201ENST00000412399 783 ntBASIC17.19■□□□□ 0.34
CBX8Q9HC52 AC009078.2-202ENST00000463353 338 ntBASIC17.19■□□□□ 0.34
CBX8Q9HC52 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 AC105021.1-202ENST00000570572 669 ntBASIC17.19■□□□□ 0.34
CBX8Q9HC52 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 UXT-AS1-201ENST00000590504 1525 ntBASIC17.19■□□□□ 0.34
CBX8Q9HC52 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CBX8Q9HC52 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CBX8Q9HC52 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 AC069335.1-201ENST00000489972 472 ntBASIC17.18■□□□□ 0.34
CBX8Q9HC52 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CBX8Q9HC52 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.18■□□□□ 0.34
CBX8Q9HC52 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AC011474.4-201ENST00000623523 2076 ntBASIC17.17■□□□□ 0.34
CBX8Q9HC52 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CBX8Q9HC52 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CBX8Q9HC52 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms