Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AC136759.1-202ENST00000530858 2194 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 AC005252.3-201ENST00000623855 2258 ntBASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 MED22-202ENST00000371999 987 ntTSL 3 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 AC018712.1-201ENST00000455767 687 ntBASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 BNIP3P1-202ENST00000550043 1585 ntBASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 AL691432.1-201ENST00000596308 1422 ntBASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 IFNL4P1-201ENST00000607083 540 ntBASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 HSPA7-201ENST00000445535 1927 ntBASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SND1-IT1Q9HBX3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SND1-IT1Q9HBX3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms