Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AC010336.2-201ENST00000564226 506 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AC051619.7-201ENST00000568314 623 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AL136317.3-201ENST00000618497 906 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 AL645728.2-202ENST00000641679 227 ntBASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.84□□□□□ -0.03
LRTM1Q9HBL6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LRTM1Q9HBL6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.83□□□□□ -0.03
LRTM1Q9HBL6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AL355385.1-201ENST00000606123 409 ntBASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AC073592.8-201ENST00000624126 511 ntBASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 Z92544.3-201ENST00000624747 417 ntBASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AL109936.8-201ENST00000641772 604 ntBASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRTM1Q9HBL6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 REXO1L4P-201ENST00000605109 1937 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 SDHAP3-202ENST00000515467 728 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 TUBB3P1-201ENST00000405796 1332 ntBASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRTM1Q9HBL6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms