Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AL662844.1-201ENST00000546340 181 ntBASIC18.94■□□□□ 0.62
UPF2Q9HAU5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AP000842.3-202ENST00000569238 1080 ntBASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 MTHFR-210ENST00000641407 2387 ntBASIC18.94■□□□□ 0.62
UPF2Q9HAU5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 AP000845.1-201ENST00000581677 2131 ntBASIC18.94■□□□□ 0.62
UPF2Q9HAU5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UPF2Q9HAU5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 PEG13-201ENST00000631594 5667 ntBASIC18.93■□□□□ 0.62
UPF2Q9HAU5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 RNA5SP419-201ENST00000515908 135 ntBASIC18.93■□□□□ 0.62
UPF2Q9HAU5 IGHV3-62-201ENST00000520057 340 ntBASIC18.93■□□□□ 0.62
UPF2Q9HAU5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 AC145285.3-201ENST00000564603 959 ntBASIC18.93■□□□□ 0.62
UPF2Q9HAU5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 AL513190.1-201ENST00000621254 727 ntBASIC18.93■□□□□ 0.62
UPF2Q9HAU5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPF2Q9HAU5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AL031595.1-201ENST00000623969 4709 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 MIR346-201ENST00000362234 95 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPF2Q9HAU5 MRPL3P1-201ENST00000400109 1033 ntBASIC18.92■□□□□ 0.62
UPF2Q9HAU5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms