Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 AL391069.4-201ENST00000609583 481 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 AC004840.1-201ENST00000636359 365 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 REXO1L2P-201ENST00000425429 2069 ntBASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC40Q9H9A6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 OR2I1P-210ENST00000642037 4691 ntBASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 AL589987.1-201ENST00000453380 819 ntBASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 AL390955.2-201ENST00000603032 514 ntBASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 ACE3P-201ENST00000423435 1973 ntBASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC40Q9H9A6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 AL390755.1-201ENST00000623716 2027 ntBASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 AC036164.1-201ENST00000570544 333 ntBASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms