Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 C20orf181-201ENST00000623918 480 ntBASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AC134684.3-201ENST00000641758 218 ntBASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 AP000845.1-201ENST00000581677 2131 ntBASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
NDUFAF3Q9BU61 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AC055717.3-201ENST00000622967 595 ntBASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 BCAR1-209ENST00000546196 1340 ntBASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AC019294.4-201ENST00000561777 2905 ntBASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFAF3Q9BU61 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms