Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 SLC25A24P2-201ENST00000415059 510 ntBASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 AC004066.1-201ENST00000502488 802 ntBASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNGAP1Q96PV0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SYNGAP1Q96PV0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYNGAP1Q96PV0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 AP003680.1-201ENST00000598970 3660 ntBASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 KRT8P14-201ENST00000414254 1442 ntBASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 POM121L10P-201ENST00000436994 1285 ntBASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 HSPB1P2-201ENST00000448722 546 ntBASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 BX284668.4-201ENST00000453917 508 ntBASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNGAP1Q96PV0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 AC127383.1-201ENST00000444697 1800 ntBASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 AC007787.1-201ENST00000588095 1583 ntBASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 AC079178.1-201ENST00000420915 656 ntBASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 IGHJ2P-201ENST00000454480 60 ntBASIC17.38■□□□□ 0.37
SYNGAP1Q96PV0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms