Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC025048.3-201ENST00000590609 569 ntBASIC14.6□□□□□ -0.07
COL21A1Q96P44 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC011467.4-201ENST00000594891 528 ntBASIC14.6□□□□□ -0.07
COL21A1Q96P44 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 AC005702.4-201ENST00000618393 416 ntBASIC14.6□□□□□ -0.07
COL21A1Q96P44 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.6□□□□□ -0.07
COL21A1Q96P44 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COL21A1Q96P44 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 LINC00552-201ENST00000625151 2579 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 BTBD7P1-201ENST00000447253 1453 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 TARDBPP1-201ENST00000442013 1203 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC044860.1-202ENST00000559481 777 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC074044.1-201ENST00000609673 707 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 AL109936.8-201ENST00000641772 604 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 Z97205.2-201ENST00000564697 1639 ntBASIC14.59□□□□□ -0.07
COL21A1Q96P44 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.59□□□□□ -0.07
COL21A1Q96P44 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL21A1Q96P44 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
COL21A1Q96P44 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
COL21A1Q96P44 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
COL21A1Q96P44 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL21A1Q96P44 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
COL21A1Q96P44 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
COL21A1Q96P44 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.58□□□□□ -0.07
COL21A1Q96P44 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL21A1Q96P44 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.58□□□□□ -0.07
COL21A1Q96P44 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms