Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 ALG1L6P-201ENST00000515248 758 ntBASIC16.55■□□□□ 0.24
LRCH3Q96II8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 RPL17P45-201ENST00000586289 509 ntBASIC16.55■□□□□ 0.24
LRCH3Q96II8 AC148477.4-201ENST00000613430 1793 ntBASIC16.55■□□□□ 0.24
LRCH3Q96II8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 AC132872.4-202ENST00000622924 2756 ntBASIC16.55■□□□□ 0.24
LRCH3Q96II8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH3Q96II8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 PCGF3-213ENST00000620529 1899 ntBASIC16.54■□□□□ 0.24
LRCH3Q96II8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC026691.1-201ENST00000602502 2017 ntBASIC16.54■□□□□ 0.24
LRCH3Q96II8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AP003171.2-201ENST00000528208 925 ntBASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC027139.1-201ENST00000565286 951 ntBASIC16.54■□□□□ 0.24
LRCH3Q96II8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.54■□□□□ 0.24
LRCH3Q96II8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRCH3Q96II8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 MRPL37P1-201ENST00000592451 1337 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 AL391005.1-201ENST00000623953 2435 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 OR2K2-202ENST00000374428 1038 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 BRI3P1-201ENST00000440440 378 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 CHMP1AP1-201ENST00000445563 662 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 TUBB8P8-201ENST00000458717 1058 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 AL160314.3-201ENST00000556041 767 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.53■□□□□ 0.24
LRCH3Q96II8 AC090164.2-201ENST00000611487 516 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 AC244250.3-201ENST00000620749 366 ntBASIC16.53■□□□□ 0.24
LRCH3Q96II8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRCH3Q96II8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms