Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.71□□□□□ -0.21
RFT1Q96AA3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RFT1Q96AA3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RFT1Q96AA3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RFT1Q96AA3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
RFT1Q96AA3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.71□□□□□ -0.22
RFT1Q96AA3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
RFT1Q96AA3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.71□□□□□ -0.22
RFT1Q96AA3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RFT1Q96AA3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 AL591424.1-201ENST00000442569 1213 ntBASIC13.7□□□□□ -0.22
RFT1Q96AA3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 FDX1P1-201ENST00000449115 551 ntBASIC13.7□□□□□ -0.22
RFT1Q96AA3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.7□□□□□ -0.22
RFT1Q96AA3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 AL691432.1-201ENST00000596308 1422 ntBASIC13.7□□□□□ -0.22
RFT1Q96AA3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RFT1Q96AA3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.7□□□□□ -0.22
RFT1Q96AA3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RFT1Q96AA3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RFT1Q96AA3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms