Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LMO3Q8TAP4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AC023908.3-201ENST00000564211 3047 ntBASIC16.38■□□□□ 0.21
LMO3Q8TAP4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AC140912.1-201ENST00000577171 1054 ntBASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LMO3Q8TAP4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 DGCR5-201ENST00000399539 862 ntBASIC16.37■□□□□ 0.21
LMO3Q8TAP4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.37■□□□□ 0.21
LMO3Q8TAP4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.36■□□□□ 0.21
LMO3Q8TAP4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms