Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD2Q8NHY2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 AC152010.1-201ENST00000415779 2006 ntBASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 AC011467.4-201ENST00000594891 528 ntBASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 AC007064.4-201ENST00000637740 555 ntBASIC15.27■□□□□ 0.04
RFWD2Q8NHY2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFWD2Q8NHY2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 MED15P5-201ENST00000423150 992 ntBASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFWD2Q8NHY2 AC018442.1-201ENST00000421439 2061 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms