Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AL138709.1-201ENST00000614840 1693 ntBASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC006001.1-201ENST00000325130 474 ntBASIC15.65■□□□□ 0.1
CHPFQ8IZ52 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC091271.1-201ENST00000611877 1162 ntBASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC126177.1-201ENST00000547829 2218 ntBASIC15.65■□□□□ 0.1
CHPFQ8IZ52 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHPFQ8IZ52 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AL133338.1-201ENST00000565695 1517 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 KLF2P2-201ENST00000416807 1039 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AC114812.1-204ENST00000449669 728 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 RNA5SP486-201ENST00000515961 83 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AC243960.2-201ENST00000600996 747 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AHCYP2-201ENST00000430630 1300 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 AC010491.1-201ENST00000563101 2797 ntBASIC15.64■□□□□ 0.09
CHPFQ8IZ52 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHPFQ8IZ52 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 AC092850.2-201ENST00000623821 2697 ntBASIC15.63■□□□□ 0.09
CHPFQ8IZ52 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 RNU1-114P-201ENST00000365297 166 ntBASIC15.63■□□□□ 0.09
CHPFQ8IZ52 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHPFQ8IZ52 ACTBP8-201ENST00000403258 1108 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms