Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM42Q8IWZ5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 BCAR1-209ENST00000546196 1340 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 FOXO1B-201ENST00000504678 1527 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 HSPA7-201ENST00000445535 1927 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AC118758.2-201ENST00000614242 2813 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AC092865.5-201ENST00000545435 363 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AC040169.1-201ENST00000565382 521 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AC010327.5-201ENST00000586923 3061 ntBASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM42Q8IWZ5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AL607033.1-201ENST00000623900 1599 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC006504.5-208ENST00000588784 2401 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC023274.1-201ENST00000418278 595 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 RARRES2P8-201ENST00000566335 367 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC018845.2-201ENST00000568326 409 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC068137.2-201ENST00000605408 478 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 AC004877.2-201ENST00000623941 599 ntBASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM42Q8IWZ5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms