Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SKAP1Q86WV1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 Z97205.2-201ENST00000564697 1639 ntBASIC19.18■□□□□ 0.66
SKAP1Q86WV1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SKAP1Q86WV1 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 AL589739.1-201ENST00000607720 493 ntBASIC19.17■□□□□ 0.66
SKAP1Q86WV1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SKAP1Q86WV1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SKAP1Q86WV1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms