Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AC026748.1-201ENST00000624349 3251 ntBASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC004066.1-201ENST00000502488 802 ntBASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC023310.3-201ENST00000557027 670 ntBASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC100756.1-201ENST00000562736 682 ntBASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC138749.3-201ENST00000567691 622 ntBASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC116165.1-201ENST00000611806 668 ntBASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD1LQ86WJ1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 AC018442.1-201ENST00000421439 2061 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 FAM86LP-201ENST00000478302 853 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 AC005498.2-205ENST00000593218 784 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 AL662799.1-202ENST00000614205 422 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 SNX18-202ENST00000343017 3140 ntBASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD1LQ86WJ1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 AC026410.3-201ENST00000514280 936 ntBASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD1LQ86WJ1 AC093525.8-201ENST00000624099 1342 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms