Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AL133267.1-201ENST00000398220 340 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 SRD5A3P1-201ENST00000603021 949 ntBASIC13.66□□□□□ -0.22
RTTNQ86VV8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
RTTNQ86VV8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 AL121723.1-201ENST00000445194 1519 ntBASIC13.65□□□□□ -0.22
RTTNQ86VV8 AC020658.6-201ENST00000623564 1870 ntBASIC13.65□□□□□ -0.22
RTTNQ86VV8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 MIR4259-201ENST00000584466 101 ntBASIC13.65□□□□□ -0.22
RTTNQ86VV8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTTNQ86VV8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.65□□□□□ -0.22
RTTNQ86VV8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.65□□□□□ -0.23
RTTNQ86VV8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RTTNQ86VV8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.65□□□□□ -0.23
RTTNQ86VV8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AC007389.4-201ENST00000454674 793 ntBASIC13.64□□□□□ -0.23
RTTNQ86VV8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 LINC00528-201ENST00000600723 2160 ntBASIC13.64□□□□□ -0.23
RTTNQ86VV8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms