Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 AC064836.3-201ENST00000607928 673 ntBASIC15.62■□□□□ 0.09
PACS2Q86VP3 AC092953.2-201ENST00000608000 699 ntBASIC15.62■□□□□ 0.09
PACS2Q86VP3 AC006213.5-201ENST00000619673 288 ntBASIC15.62■□□□□ 0.09
PACS2Q86VP3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PACS2Q86VP3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PACS2Q86VP3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PACS2Q86VP3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PACS2Q86VP3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PACS2Q86VP3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
PACS2Q86VP3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PACS2Q86VP3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC004241.5-201ENST00000623870 2448 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 PAWRP1-201ENST00000451083 565 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC022960.2-201ENST00000616300 666 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC023024.2-201ENST00000623561 1993 ntBASIC15.61■□□□□ 0.09
PACS2Q86VP3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
PACS2Q86VP3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PACS2Q86VP3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 AP000568.1-201ENST00000282964 442 ntBASIC15.6■□□□□ 0.09
PACS2Q86VP3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 AL671883.3-201ENST00000603274 991 ntBASIC15.6■□□□□ 0.09
PACS2Q86VP3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PACS2Q86VP3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PACS2Q86VP3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms