Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRTM1Q86UE6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
LRRTM1Q86UE6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
LRRTM1Q86UE6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 BEND3P1-201ENST00000421591 1944 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 SPDYE17-201ENST00000412399 783 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC009078.2-202ENST00000463353 338 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC015910.1-201ENST00000579400 975 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC138969.3-201ENST00000546612 1459 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC138932.2-201ENST00000548268 1459 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC126755.4-201ENST00000549796 1459 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 AC015802.1-201ENST00000588104 1449 ntBASIC13.39□□□□□ -0.27
LRRTM1Q86UE6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AC104457.1-201ENST00000401024 814 ntBASIC13.38□□□□□ -0.27
LRRTM1Q86UE6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms