Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.6□□□□□ -0.39
CSMD2Q7Z408 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD2Q7Z408 AC055811.3-201ENST00000584952 686 ntBASIC12.6□□□□□ -0.39
CSMD2Q7Z408 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CSMD2Q7Z408 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AC053503.3-201ENST00000448375 114 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AP003398.1-201ENST00000531124 318 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AL603764.1-201ENST00000636452 321 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AC244197.1-201ENST00000456494 951 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 TREHP1-201ENST00000531328 465 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 SIGLEC18P-201ENST00000602271 909 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 HMGB1P24-201ENST00000611897 328 ntBASIC12.59□□□□□ -0.39
CSMD2Q7Z408 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CSMD2Q7Z408 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 AC093826.1-201ENST00000508655 993 ntBASIC12.58□□□□□ -0.39
CSMD2Q7Z408 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 LINC01783-202ENST00000614408 828 ntBASIC12.58□□□□□ -0.39
CSMD2Q7Z408 BX284668.2-205ENST00000619677 828 ntBASIC12.58□□□□□ -0.39
CSMD2Q7Z408 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.58□□□□□ -0.39
CSMD2Q7Z408 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC004554.1-201ENST00000422830 1468 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC026434.2-201ENST00000506094 1078 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC084752.1-201ENST00000509766 622 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 PMEL-214ENST00000550447 901 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AP001184.1-201ENST00000637936 376 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC092638.2-201ENST00000441105 947 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 CR392039.1-201ENST00000623217 204 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC011471.3-201ENST00000623576 402 ntBASIC12.58□□□□□ -0.4
CSMD2Q7Z408 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CSMD2Q7Z408 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms